Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922705.1_cds_XP_016471478.1_63815
CDS Infomation

[gene=LOC107793604] [db_xref=GeneID:107793604] [protein=serine/threonine-protein kinase HT1-like] [protein_id=XP_016471478.1] [location=join(11041..11202,11669..11861,12777..13831)] [gbkey=CDS]
Sequence

ATGTACCTCGAGATCGGTTCTCATCGACCCAGTACTGAGGAGGTTTTTTCAATCTTGAAA
TCGGCAATAGTAGGGCACCCTGCCGGAATGAAATCCTCAATGGGATATTCTGCCATAGCT
CCGTCGTCAACAGGCCGTGATAAAGAGGGGCTTCCTTTTGCGGTCGAGGATAAACCTCGT
GTTATATTGAACCATGGTGCAAAGTTAGATCGCCGAGCTCGTGACCCAGAGATCGATCAA
GATCGAGATCGGCCAAGATCAAGACCAAGCAAGATAAAGATCGAGCAAGATCGAGGGAAG
CTTACCGAGCCAGATAACAGAAAGTCGAGATATCCGCAATCGGGCAAGGATCACGAAACA
AGAATTAGAGCAGAGATTGATTTGAGAAGAATGGACGAGCAGCTTGAAAGACATTTAGAT
CGAGTATTTAACAATCACAAGTGCTGTGAAAGTGAAGAACCAAAAGTACAAGTAATCAAG
AAAGAAGAATGGGAATTGGACTGCCAAAGAATTAAGGTCAAGAATCTTATTGGTCAAGGG
GCATATGGATCAGTTTACAAAGGAGGTTACAATGGAAAAGAAGTCGCAGTTAAAATACTT
GATTTGAGAGATGAAGATAGAAGAGCTATAGTAACAAAGGCTTTTACACAAGAAGTTTCT
ATATGGTACAACCTAAGTCACCCAAATATTGCTAAGTTAATCGGAGCTTCGAAAAACAAA
GTGCCTGAAATTAAACTCAAATCTGAAAATAGCCAACATCGTCGTCGTCCTACGAAAGAT
GGATATTGCATTGTGGTAGAATTTTTTCCTAGAGGCACACTCAAATCCTACCTCATTAAA
AACCACATCAAGAAGTTACCGTTACATACTGTAATTAAACTAGCGTTAGATGTTGCAAAA
GGGTTGAGTTATCTTCACTCACAAAAAATTGTTCATAGAGATGTGAAGACTGAGAATTTA
CTTCTTGACAATGAAGGAAGAGTGAAAATAATAGACTTTGGAGTTTCTAGAGTAGTGGCT
TCTTGTCCTATTGATATGACAGGCCAAAATGGCACAATGGGATATATGGCTCCTGAGGTT
CTTGCTTGTTTGCCATATGATCATAAATGTGATGTTTATAGTTTTGGAATTTGTTTGTGG
GAAATATACAGTTGTTCAATGCCATATCCTGAACAAATTCCCCTTTCTAAAACTTCTCCT
GATATTTACAAAGGTCGAAGGCCTGAAATACCAAACTCTTGTCCAAGTGTTTTGGCTGAT
ATAATGAAGAAATGTTGGGATGCAAACCCTAAAAGGAGACCAGAGATGCATGAGGTGGTT
ATGATGTTGGAAGCAATTGACACATCTGAATTAGCTACAGAAAATCAGTTTCAGGGTTGT
TTTTGCTTGATAGGACGAAAAGGGTTATAA

Peptide Sequence

PEP ID

XP_016471478.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tabacum]
Sequence

MYLEIGSHRPSTEEVFSILKSAIVGHPAGMKSSMGYSAIAPSSTGRDKEGLPFAVEDKPR
VILNHGAKLDRRARDPEIDQDRDRPRSRPSKIKIEQDRGKLTEPDNRKSRYPQSGKDHET
RIRAEIDLRRMDEQLERHLDRVFNNHKCCESEEPKVQVIKKEEWELDCQRIKVKNLIGQG
AYGSVYKGGYNGKEVAVKILDLRDEDRRAIVTKAFTQEVSIWYNLSHPNIAKLIGASKNK
VPEIKLKSENSQHRRRPTKDGYCIVVEFFPRGTLKSYLIKNHIKKLPLHTVIKLALDVAK
GLSYLHSQKIVHRDVKTENLLLDNEGRVKIIDFGVSRVVASCPIDMTGQNGTMGYMAPEV
LACLPYDHKCDVYSFGICLWEIYSCSMPYPEQIPLSKTSPDIYKGRRPEIPNSCPSVLAD
IMKKCWDANPKRRPEMHEVVMMLEAIDTSELATENQFQGCFCLIGRKGL

Transcript Sequence

Gene sequence data has not been registered.